Type	Tissue	Mutation	HLA	Peptide	Deep_bind	Deep_imm	MHCf_rank (%)	Net4_aff (nM)	Net4_rank (%)	TPM	Frequency in the tissue	Frequency in all samples
INDEL	Brain	PDGFRA_N848_Y849insF	HLA-A02:01	IMHDSNFYV	0.9983	0.5011	0.0121	2.5	0.0076	86.54	1/130	1/7086
INDEL	Brain	PDGFRA_N848_Y849insF	HLA-A32:01	IMHDSNFYV	0.5713	0.9406	0.7151	285.8	0.4776	86.54	1/130	1/7086
INDEL	Brain	PDGFRA_N848_Y849insF	HLA-B15:01	RDIMHDSNFY	0.9885	0.9538	1.8708	229.4	1.0122	86.54	2/130	2/7086
INDEL	Brain	PDGFRA_N848_Y849insF	HLA-B15:01	RDIMHDSNFY	0.9885	0.9538	1.8708	229.4	1.0122	86.54	2/130	2/7086
INDEL	Brain	PDGFRA_N848_Y849insF	HLA-A02:01	DIMHDSNFYV	0.9359	0.6578	1.6418	28.7	0.3872	86.54	1/130	1/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	YAASLLPCM	0.9988	0.9886	0.2039	10.3	0.0366	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	YAASLLPCM	0.9988	0.9886	0.2039	10.3	0.0366	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	ASLLPCMSL	0.9988	0.9935	0.3461	457.6	0.9465	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	ASLLPCMSL	0.9988	0.9935	0.3461	457.6	0.9465	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-A02:01	SLLPCMSLL	0.966	0.6672	0.2367	23.7	0.3256	22.26	1/130	1/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	YAASLLPCMSL	0.9997	0.9862	0.5723	308.8	0.7356	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-C03:03	YAASLLPCMSL	0.9997	0.9862	0.5723	308.8	0.7356	22.26	2/130	2/7086
INDEL	Brain	RIMKLB_S309_R315delinsC	HLA-A02:01	SLLPCMSLLSV	0.997	0.6141	0.585	20.2	0.2748	22.26	1/130	1/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-A32:01	RSSDSSLLF	0.9946	0.9922	0.1498	145.5	0.2598	4.91	1/130	1/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-B15:01	RSSDSSLLF	0.9885	0.956	0.267	85.3	0.4566	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-B15:01	RSSDSSLLF	0.9885	0.956	0.267	85.3	0.4566	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-C03:03	RSSDSSLLF	0.9705	0.9931	0.5019	279.7	0.6933	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-C03:03	RSSDSSLLF	0.9705	0.9931	0.5019	279.7	0.6933	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-A02:01	LLFSLFLNL	0.9575	0.5515	0.2841	16	0.1987	4.91	1/130	1/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-A32:01	LLFSLFLNL	0.7224	0.9764	0.7081	198.6	0.3505	4.91	1/130	1/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-C03:03	FSLFLNLVI	0.9286	0.9929	1.0757	71.4	0.2857	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-C03:03	FSLFLNLVI	0.9286	0.9929	1.0757	71.4	0.2857	4.91	2/130	2/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-A02:01	SLLFSLFLNL	0.9527	0.637	0.8813	24.7	0.339	4.91	1/130	1/7086
INDEL	Brain	ZNF280D_V119Lfs*12	HLA-A02:01	LLFSLFLNLV	0.9891	0.5223	0.3787	17.7	0.2325	4.91	1/130	1/7086
INDEL	Brain	RB1_L267Rfs*3	HLA-A31:01	RSARIAKQR	0.9861	0.5317	0.4277	24.3	0.1824	27.35	1/130	1/7086
INDEL	Brain	ROBO1_P7Lfs*25	HLA-C16:01	FGHDITPQL	0.9793	0.9912	0.1448	43.1	0.1318	65.11	1/130	1/7086
INDEL	Brain	APPBP2_A357Efs*17	HLA-B18:01	HELKLRKSY	0.9964	0.8674	0.1596	81.2	0.0573	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-A02:01	ALFQAGLEL	0.9851	0.6903	0.1401	51.6	0.6462	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-C12:03	ALFQAGLEL	0.9917	0.9879	0.3445	221.4	0.8882	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-C12:03	LQKELLVSL	0.9995	0.9758	0.4659	293.2	1.0708	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-C12:03	LLVSLPTSY	0.5507	0.9848	0.5982	355.5	1.2303	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-C12:03	LVSLPTSYL	0.9719	0.9902	0.7726	92	0.4164	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-C12:03	TSYLKIIFF	0.7822	0.9729	0.0583	144.5	0.6268	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-A02:01	ALFQAGLELL	0.9915	0.6598	0.3199	46.5	0.5914	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-A02:01	LLQKELLVSL	0.9642	0.5947	0.9867	39.7	0.516	4.51	1/130	1/7086
INDEL	Brain	APPBP2_H356Qfs*32	HLA-A02:01	LLVSLPTSYL	0.9698	0.6921	0.4659	69.2	0.8203	4.51	1/130	1/7086
INDEL	Brain	MYD88_E117Sfs*15	HLA-A02:01	VLLSWDPAL	0.9778	0.5237	0.0356	12.4	0.1486	49.43	2/130	2/7086
INDEL	Brain	MYD88_E117Sfs*15	HLA-A02:01	VLLSWDPAL	0.9778	0.5237	0.0356	12.4	0.1486	49.43	2/130	2/7086
INDEL	Brain	MRPL13_L106Tfs*26	HLA-C02:02	VAIVKTSYL	0.8778	0.9866	0.0835	480.9	0.3336	16.04	1/130	1/7086
INDEL	Brain	MRPL13_L106Tfs*26	HLA-B35:01	DPVAIVKTSY	0.9825	0.7228	0.0861	409.7	0.7764	16.04	1/130	1/7086
INDEL	Brain	STRN_D274Yfs*9	HLA-B27:05	VRKKALPYK	0.9851	0.9397	0.8991	474.6	1.1984	15.54	1/130	1/7086
INDEL	Brain	NF1_Q2302Hfs*17	HLA-C12:03	IALTKLHHF	0.9398	0.9821	0.2896	339.7	1.1887	2.66	1/130	1/7086
INDEL	Brain	NF1_Q2302Hfs*17	HLA-B38:01	HHFLIRTRL	0.9927	0.9446	0.0618	172.5	0.0238	2.66	1/130	1/7086
INDEL	Brain	ETV1_M277Sfs*65	HLA-C07:02	KRAPGSFMM	0.9783	0.9608	0.1547	147.1	0.0858	48.27	1/130	1/7086
INDEL	Brain	ETV1_M277Sfs*65	HLA-A02:01	WLIPAEQKAV	0.9453	0.6479	1.0705	232	1.805	48.27	1/130	1/7086
INDEL	Brain	NF1_D633Ifs*55	HLA-C12:03	YGVGCIFLL	0.7737	0.9908	0.9711	433.1	1.4089	4.7	1/130	1/7086
INDEL	Brain	NF1_D633Ifs*55	HLA-C12:03	SGREKGTPL	0.9626	0.9487	0.9173	389.6	1.3163	4.7	1/130	1/7086
INDEL	Brain	PTEN_I203Sfs*39	HLA-A68:01	ETSNVQWR	0.9974	0.5117	0.7905	147.6	1.1487	9.49	1/130	1/7086
INDEL	Brain	PTEN_I203Sfs*39	HLA-A02:01	FLQFRTHTT	0.77	0.6932	1.2465	117	1.1705	9.49	1/130	1/7086
INDEL	Brain	HYOU1_S763Pfs*30	HLA-C07:01	QRSSVRRSL	0.9982	0.7409	0.3577	419.2	0.145	55.64	1/130	1/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-B57:01	RVVSVGCPW	0.9969	0.9855	0.3787	15.8	0.0272	14.54	1/130	1/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-B57:01	VGCPWPMHW	0.9994	0.9885	0.1704	149.6	0.3071	14.54	1/130	1/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-C06:02	YAVGRTCYV	0.9844	0.9939	0.3009	278.5	0.0966	14.54	1/130	2/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-B57:01	SVGCPWPMHW	0.9995	0.9897	0.3851	184.3	0.3602	14.54	1/130	1/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-B15:01	WSYAVGRTCY	0.9981	0.8685	1.0576	43.5	0.2145	14.54	1/130	1/7086
INDEL	Brain	AARS2_V728Cfs*33	HLA-B57:01	VSVGCPWPMHW	1	0.9851	0.3542	37.7	0.1021	14.54	1/130	1/7086
INDEL	Brain	EIF4ENIF1_V277Wfs*46	HLA-C16:02	SSLHRSLRL	0.9343	0.9914	0.241	167.8	0.1399	7.53	1/130	1/7086
INDEL	Brain	EIF4ENIF1_V277Wfs*46	HLA-C12:03	SSLHRSLRL	0.8433	0.9789	0.3914	288.9	1.0597	7.53	1/130	1/7086
INDEL	Brain	EIF4ENIF1_V277Wfs*46	HLA-C12:03	SSPQETLTL	0.9064	0.9482	0.4675	382.7	1.3008	7.53	1/130	1/7086
INDEL	Brain	EIF4ENIF1_V277Wfs*46	HLA-C16:02	LTLMSSLTL	0.9225	0.9893	0.7399	118.1	0.0774	7.53	1/130	1/7086
INDEL	Brain	EIF4ENIF1_V277Wfs*46	HLA-C12:03	LTLMSSLTL	0.9579	0.9855	1.1706	75.5	0.3529	7.53	1/130	1/7086
INDEL	Brain	RANBP2_D1965Rfs*21	HLA-B39:01	FRCWRKIIL	0.9721	0.7008	0.5829	329.7	0.3454	23.28	1/130	1/7086
INDEL	Brain	STAG2_M803Vfs*5	HLA-C12:03	FSHQIVRRA	0.9506	0.9685	0.7438	238.6	0.9336	11.36	1/130	1/7086
INDEL	Brain	AGFG1_A369Vfs*17	HLA-C12:03	VSVPSQSSV	0.8918	0.9663	0.6429	92	0.4168	24.23	1/130	1/7086
INDEL	Brain	AGFG1_A369Vfs*17	HLA-B39:01	KHLQTSMQL	0.9991	0.9417	0.4426	323.6	0.3402	24.23	1/130	1/7086
INDEL	Brain	AGFG1_A369Vfs*17	HLA-A32:01	HLQTSMQLW	0.9852	0.9785	0.259	400.7	0.6309	24.23	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFL	0.9944	0.6983	0.0778	2.8	0.0084	5.53	3/130	3/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-C12:03	LTTTSPQSI	0.6152	0.9632	1.2828	412.6	1.3661	5.53	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-C12:03	TTSPQSISI	0.9514	0.9253	0.6352	228.5	0.908	5.53	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFLA	0.9917	0.5579	0.3495	11.6	0.1385	5.53	3/130	3/7086
INDEL	Brain	PLCB1_L159Afs*26	HLA-C12:03	RAYSSQKHI	0.7213	0.9572	0.555	117.9	0.5192	3.67	1/130	1/7086
INDEL	Brain	PLCB1_L159Afs*26	HLA-C12:03	YSSQKHISL	0.9997	0.9673	0.2039	17.1	0.0567	3.67	1/130	1/7086
INDEL	Brain	PLCB1_L159Afs*26	HLA-C01:02	YSSQKHISL	0.9992	0.9236	0.2025	481.3	0.0127	3.67	1/130	1/7086
INDEL	Brain	PLCB1_L159Afs*26	HLA-C12:03	SSQKHISLV	0.9581	0.9442	0.5868	412.2	1.3652	3.67	1/130	1/7086
INDEL	Brain	ZNF280C_S170Lfs*10	HLA-C07:02	FREGMKNTL	0.785	0.9736	0.3107	193.2	0.1243	3.81	1/130	1/7086
INDEL	Brain	COL6A3_A2957Lfs*44	HLA-C15:02	AAVRPPALL	0.9982	0.9265	0.2856	310.3	0.3386	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2957Lfs*44	HLA-A30:01	AVRPPALLL	0.9875	0.9181	0.0631	32.9	0.1687	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2957Lfs*44	HLA-C15:02	AVRPPALLL	0.9923	0.9174	0.1072	102.9	0.0974	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2957Lfs*44	HLA-C15:02	AAVRPPALLL	0.9985	0.9201	0.511	492.4	0.5209	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2956Lfs*45	HLA-C15:02	AAVRPPLLL	0.9992	0.8414	0.1072	150.6	0.1604	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2956Lfs*45	HLA-A30:01	AVRPPLLLL	0.9903	0.8738	0.0643	28	0.1302	1.9	1/130	1/7086
INDEL	Brain	COL6A3_A2956Lfs*45	HLA-C15:02	AVRPPLLLL	0.9922	0.8127	0.1212	139.7	0.1451	1.9	1/130	1/7086
INDEL	Brain	KSR2_L536Sfs*61	HLA-C12:03	SSPAPPSLL	0.9394	0.9814	0.4456	268.9	1.0052	1.21	1/130	1/7086
INDEL	Brain	DICER1_C1053_L1058del	HLA-B15:03	ASLWRKAVY	0.6666	0.9005	0.2239	94.3	1.3692	50.88	1/130	1/7086
INDEL	Brain	DICER1_C1053_L1058del	HLA-A74:01	SLWRKAVYR	0.9755	0.6058	0.0226	45.1	0.0095	50.88	1/130	1/7086
INDEL	Brain	DICER1_C1053_L1058del	HLA-A74:01	ASLWRKAVYR	0.99	0.6412	0.0383	171.6	0.0665	50.88	1/130	1/7086
INDEL	Brain	MARS_C405delinsSLPDYPSFVSRS	HLA-B39:01	DRFVEGVSL	0.9992	0.9527	0.0177	96.2	0.104	520.02	1/130	1/7086
INDEL	Brain	MARS_C405delinsSLPDYPSFVSRS	HLA-C12:03	VSLPDYPSF	0.6886	0.9812	0.3398	308.6	1.1104	520.02	1/130	1/7086
INDEL	Brain	MARS_C405delinsSLPDYPSFVSRS	HLA-C12:03	SLPDYPSFV	0.6847	0.9867	0.2573	203.9	0.8358	520.02	1/130	1/7086
INDEL	Brain	MARS_C405delinsSLPDYPSFVSRS	HLA-A31:01	SLPDYPSFVSR	0.9878	0.7959	0.1168	180.6	1.1216	520.02	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-B39:01	YKQKKGDVL	0.9469	0.6563	1.2725	234.3	0.2513	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-B39:01	LRFKKIHPV	0.9086	0.8471	1.1142	419.7	0.4142	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-C07:02	LRFKKIHPV	0.7912	0.9364	0.713	181	0.1148	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-B39:01	MKMMIPSLL	0.9985	0.9035	1.6875	21.9	0.0149	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-C07:02	MKMMIPSLL	0.8095	0.9512	1.182	308.4	0.2033	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-C07:02	RKFGRFLKM	0.9259	0.9755	0.0962	307.4	0.2026	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-A31:01	KTRVILRKKR	0.9753	0.5507	0.9711	36.8	0.2987	9.12	1/130	1/7086
INDEL	Brain	ATRX_K1424Gfs*65	HLA-A31:01	RFKKIHPVKTR	0.9896	0.7953	1.0655	49.8	0.4126	9.12	1/130	1/7086
INDEL	Brain	PTEN_A328Qfs*16	HLA-C16:01	KTKPTDTFL	0.8954	0.9707	0.1498	294.5	0.9281	19.49	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFL	0.9944	0.6983	0.0778	2.8	0.0084	3.39	3/130	3/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFL	0.9944	0.6983	0.0778	2.8	0.0084	3.39	3/130	3/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-C16:01	SGLLFFLAL	0.7561	0.9904	0.9711	342	1.0356	3.39	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-C16:01	TTSPQSISI	0.8176	0.9422	0.5245	234.9	0.765	3.39	1/130	1/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFLA	0.9917	0.5579	0.3495	11.6	0.1385	3.39	3/130	3/7086
INDEL	Brain	NF1_K1661Gfs*36	HLA-A02:01	FLSGLLFFLA	0.9917	0.5579	0.3495	11.6	0.1385	3.39	3/130	3/7086
INDEL	Brain	RPL5_V6Lfs*13	HLA-A02:01	KLLRIRPTL	0.8998	0.6674	0.1775	105.6	1.0935	1291.71	1/130	1/7086
INDEL	Brain	CHD8_S2202Wfs*5	HLA-A02:01	HLLDSPWRI	0.9923	0.7139	0.0073	8.2	0.0881	18.56	1/130	1/7086
INDEL	Brain	TGFB2_N274Kfs*19	HLA-C03:04	TSPANVIAL	0.997	0.9866	0.1401	157.7	0.4828	7.8	1/130	1/7086
INDEL	Brain	TGFB2_N274Kfs*19	HLA-B40:01	WEDPTSPANV	0.9585	0.9137	1.8202	444.1	0.6503	7.8	1/130	1/7086
INDEL	Brain	TGFB2_N274Kfs*19	HLA-B40:01	WEDPTSPANVI	0.998	0.542	0.8271	290.5	0.4983	7.8	1/130	1/7086
INDEL	Brain	SGCB_K159Qfs*7	HLA-C03:04	LSVENNQNF	0.9964	0.9901	0.8169	250.7	0.6496	109.09	1/130	1/7086
INDEL	Brain	DCAF13_K74Nfs*23	HLA-C03:04	LANIQRSWL	0.9986	0.9786	1.5203	486	0.9928	20.63	1/130	1/7086
INDEL	Brain	DCAF13_K74Nfs*23	HLA-A02:01	WLLSFLGRV	0.9935	0.6739	0.2335	12.5	0.1497	20.63	2/130	2/7086
INDEL	Brain	DCAF13_K74Nfs*23	HLA-A02:01	WLLSFLGRV	0.9935	0.6739	0.2335	12.5	0.1497	20.63	2/130	2/7086
INDEL	Brain	DCAF13_K74Nfs*23	HLA-A02:01	FLGRVMERL	0.9867	0.6708	0.2573	23.6	0.3233	20.63	2/130	2/7086
INDEL	Brain	DCAF13_K74Nfs*23	HLA-A02:01	FLGRVMERL	0.9867	0.6708	0.2573	23.6	0.3233	20.63	2/130	2/7086
INDEL	Brain	MAP4K2_T465Nfs*52	HLA-A02:01	LLLQGLQWL	0.9769	0.7625	0.2896	20.6	0.2805	4.53	2/130	2/7086
INDEL	Brain	MAP4K2_T465Nfs*52	HLA-A02:01	LLLQGLQWL	0.9769	0.7625	0.2896	20.6	0.2805	4.53	2/130	2/7086
INDEL	Brain	MAP4K2_T465Nfs*52	HLA-A02:01	RLLLQGLQWL	0.9586	0.7725	1.2862	259.6	1.944	4.53	2/130	2/7086
INDEL	Brain	MAP4K2_T465Nfs*52	HLA-A02:01	RLLLQGLQWL	0.9586	0.7725	1.2862	259.6	1.944	4.53	2/130	2/7086
INDEL	Brain	HDX_K212Nfs*105	HLA-C14:02	LGFKGHISL	0.7379	0.9822	0.6314	211.8	0.6397	5.43	1/130	1/7086
INDEL	Brain	HDX_K212Nfs*105	HLA-A66:01	EIVCPLQWR	0.9985	0.9327	0.0539	311.1	0.1189	5.43	1/130	1/7086
INDEL	Brain	HDX_K212Nfs*105	HLA-C14:02	FWEEMPHRSL	0.9901	0.9735	0.2102	351.3	0.9875	5.43	1/130	1/7086
INDEL	Brain	IL3RA_I50Tfs*14	HLA-C03:04	TSVLKTPTI	0.9928	0.9833	0.7514	491.6	1.0011	10.2	1/130	1/7086
INDEL	Brain	IL3RA_I50Tfs*14	HLA-C03:04	SVLKTPTIL	0.9951	0.9814	0.4883	119.8	0.4058	10.2	1/130	1/7086
INDEL	Brain	TACR1_F282Lfs*11	HLA-B08:01	KLQPHHLLL	0.706	0.779	0.5637	477.2	0.7384	45.98	1/130	1/7086
INDEL	Brain	TACR1_F282Lfs*11	HLA-C07:02	KLQPHHLLL	0.8078	0.9748	0.3624	368.4	0.2434	45.98	1/130	1/7086
INDEL	Brain	TACR1_F282Lfs*11	HLA-B08:01	YLKKLQPHHL	0.9836	0.6244	1.7731	267	0.457	45.98	1/130	1/7086
INDEL	Brain	DNAH1_S2394Kfs*61	HLA-C03:04	AAHSSQVPL	0.9991	0.985	0.3542	18.5	0.0783	1.85	1/130	1/7086
INDEL	Brain	DNAH1_S2394Kfs*61	HLA-C03:04	HSSQVPLHL	0.9997	0.9754	0.0177	108.6	0.3822	1.85	1/130	1/7086
INDEL	Brain	DNAH1_S2394Kfs*61	HLA-B39:06	LHLQPEGPL	0.9952	0.9879	0.7473	203	0.0919	1.85	1/130	1/7086
INDEL	Brain	DNAH1_S2394Kfs*61	HLA-C03:04	CAWGPPHCPL	0.9991	0.9906	0.6635	452.3	0.9376	1.85	1/130	1/7086
INDEL	Brain	DNAH1_S2394Kfs*61	HLA-B39:06	HHHGVCNHHL	0.9958	0.5904	0.1317	332.1	0.1466	1.85	1/130	1/7086
INDEL	Brain	SAMD15_G27Vfs*52	HLA-B35:01	LPVDFINCM	0.993	0.7513	0.0052	8.5	0.0295	1.3	1/130	1/7086
INDEL	Brain	SAMD15_G27Vfs*52	HLA-B35:01	TPWQRQTRSY	0.98	0.8969	0.2446	270.8	0.6041	1.3	1/130	1/7086
INDEL	Brain	GNB4_R68Qfs*17	HLA-B57:01	ASQCFSRW	0.9998	0.9473	0.5829	493	0.7409	20.67	1/130	1/7086
INDEL	Brain	GNB4_R68Qfs*17	HLA-B57:01	AASQCFSRW	0.9995	0.9672	0.0558	27.6	0.0714	20.67	1/130	1/7086
INDEL	Brain	GNB4_R68Qfs*17	HLA-C06:02	FSRWKINYL	0.9852	0.9912	0.388	147.6	0.0553	20.67	1/130	1/7086
INDEL	Brain	GNB4_R68Qfs*17	HLA-B57:01	QAASQCFSRW	0.9998	0.9532	0.3736	53.8	0.1446	20.67	1/130	1/7086
INDEL	Brain	GNB4_R68Qfs*17	HLA-B57:01	SQAASQCFSRW	0.9998	0.9394	0.3787	448.2	0.6885	20.67	1/130	1/7086
INDEL	Brain	FLOT1_R410Tfs*34	HLA-B15:01	HLPGESQAF	0.9974	0.9815	0.3657	454.9	1.5957	292.13	1/130	1/7086
INDEL	Brain	WDR1_E91_H92insQE	HLA-B44:03	KEQEHLLKY	0.9997	0.9577	0.0299	39.7	0.0459	95.87	1/130	1/7086
INDEL	Brain	WDR1_E91_H92insQE	HLA-B44:03	QEHLLKYEY	0.9997	0.9262	0.0073	36.8	0.042	95.87	1/130	1/7086
INDEL	Brain	WDR1_E91_H92insQE	HLA-B44:03	EQEHLLKYEY	0.9938	0.9458	1.3176	168	0.1877	95.87	1/130	1/7086
INDEL	Brain	FN1_T432Mfs*12	HLA-C07:02	FLYNNHNYM	0.6759	0.9378	0.7702	34.9	0.0134	94.74	1/130	1/7086
INDEL	Brain	FN1_T432Mfs*12	HLA-C16:01	FLYNNHNYM	0.846	0.9688	0.3386	14.9	0.0286	94.74	1/130	1/7086
INDEL	Brain	FN1_T432Mfs*12	HLA-C07:02	LYNNHNYMI	0.5635	0.8929	0.8247	310.4	0.2048	94.74	1/130	1/7086
INDEL	Brain	UBAP1_V52Yfs*39	HLA-B44:03	REYSMTSLW	0.9981	0.9616	0.0734	8.3	0.0073	224.48	1/130	1/7086
INDEL	Brain	UBAP1_V52Yfs*39	HLA-C16:01	TSLWKRKPL	0.5732	0.98	0.9711	280.8	0.8934	224.48	1/130	1/7086
INDEL	Brain	UBAP1_V52Yfs*39	HLA-B07:02	KPSGKQSAKL	0.9971	0.515	0.4614	19.8	0.0688	224.48	1/130	1/7086
INDEL	Brain	CARD6_F815Lfs*21	HLA-B15:03	CQDPFVSMY	0.5463	0.7693	0.0618	30.8	0.5592	9.38	1/130	1/7086
INDEL	Brain	CARD6_F815Lfs*21	HLA-C02:10	FVSMYRPAL	0.8009	0.9687	0.6038	431.5	0.2886	9.38	1/130	1/7086
INDEL	Brain	TIAL1_T109Qfs*20	HLA-C14:02	ISNQHLPPL	0.9958	0.9363	1.182	232.7	0.6871	12.12	1/130	1/7086
INDEL	Brain	SARS2_R387Gfs*64	HLA-C14:02	WASPPTASL	0.9624	0.9711	0.296	72.7	0.2481	4.49	1/130	1/7086
INDEL	Brain	SARS2_R387Gfs*64	HLA-C14:02	AALERSPVL	0.8827	0.9763	0.1514	256.5	0.7516	4.49	1/130	1/7086
INDEL	Brain	S1PR1_I260del	HLA-C16:01	LALLKTVIV	0.9178	0.9719	0.4167	245.5	0.7952	185.45	1/130	1/7086
INDEL	Brain	S1PR1_I260del	HLA-A02:01	ALLKTVIVL	0.9675	0.511	0.051	78.8	0.8978	185.45	2/130	2/7086
INDEL	Brain	S1PR1_I260del	HLA-A02:01	ALLKTVIVL	0.9675	0.511	0.051	78.8	0.8978	185.45	2/130	2/7086
INDEL	Brain	S1PR1_I260del	HLA-C16:01	KTVIVLSVF	0.8848	0.9654	0.2793	460.9	1.3035	185.45	1/130	1/7086
INDEL	Brain	S1PR1_I260del	HLA-A02:01	SLALLKTVIV	0.9199	0.5022	1.0601	183.2	1.5581	185.45	2/130	2/7086
INDEL	Brain	S1PR1_I260del	HLA-A02:01	SLALLKTVIV	0.9199	0.5022	1.0601	183.2	1.5581	185.45	2/130	2/7086
INDEL	Brain	NR1H2_A305Gfs*64	HLA-C16:01	HAARDSQAL	0.9048	0.967	0.5686	131.1	0.4489	59.95	1/130	1/7086
INDEL	Brain	NR1H2_A305Gfs*64	HLA-C16:01	RVYHLLEGL	0.9873	0.9888	0.6295	143	0.489	59.95	1/130	1/7086
INDEL	Brain	NR1H2_A305Gfs*64	HLA-B08:01	QPHLRVLAG	0.9605	0.6343	1.9055	314	0.5194	59.95	1/130	1/7086
INDEL	Brain	ERCC3_A79_P80insASPPVHLPTF	HLA-C07:02	TFPDGHIFL	0.7834	0.9871	0.037	195.4	0.1261	38.16	1/130	1/7086
INDEL	Brain	ERCC3_A79_P80insASPPVHLPTF	HLA-B07:02	RPLWVAASPPV	0.9927	0.7259	1.5614	100.2	0.2969	38.16	1/130	1/7086
INDEL	Brain	TSHZ3_G339Rfs*26	HLA-C07:01	GRNPQSHHL	0.9987	0.7167	0.1746	474.3	0.1621	12.1	1/130	1/7086
INDEL	Brain	PLEKHA6_G262Vfs*54	HLA-C16:01	RVPGVGNSL	0.938	0.9915	0.0412	98.6	0.3438	5.4	1/130	1/7086
INDEL	Brain	PLEKHA6_G262Vfs*54	HLA-C16:01	VGNSLPSPM	0.7609	0.9844	0.7226	127.3	0.4353	5.4	1/130	1/7086
INDEL	Brain	PLEKHA6_G262Vfs*54	HLA-C16:01	GVSHHAPTL	0.8825	0.9862	0.4491	292.1	0.9221	5.4	1/130	1/7086
INDEL	Brain	HECW2_V922Rfs*16	HLA-A02:01	LLLQSPPREV	0.9941	0.6155	0.5312	91.2	0.9984	1.97	1/130	1/7086
INDEL	Brain	MUT_M182Nfs*29	HLA-B35:02	IPLEKNVSF	0.8997	0.8525	0.0465	380.3	0.1037	9.48	1/130	1/7086
INDEL	Brain	MUT_M182Nfs*29	HLA-C16:01	SSYSSSCKF	0.505	0.9759	0.5312	45.9	0.1416	9.48	1/130	1/7086
INDEL	Brain	MUT_M182Nfs*29	HLA-B44:03	LEKNVSFHDY	0.9968	0.8578	0.5454	200.2	0.2149	9.48	1/130	1/7086
INDEL	Brain	COL1A2_P71Lfs*25	HLA-C16:01	LVSVGTLLL	0.7753	0.9854	0.8024	153.6	0.5234	171.54	1/130	1/7086
INDEL	Brain	COL1A2_P71Lfs*25	HLA-C16:01	SVGTLLLSM	0.8484	0.9824	0.721	299.7	0.9408	171.54	1/130	1/7086
INDEL	Brain	COL1A2_P71Lfs*25	HLA-A02:01	SMMEKELDL	0.9764	0.5497	0.3184	38.8	0.5056	171.54	1/130	1/7086
INDEL	Brain	COL1A2_P71Lfs*25	HLA-C16:01	SMMEKELDL	0.8969	0.9812	0.8043	449	1.2789	171.54	1/130	1/7086
INDEL	Brain	COL1A2_P71Lfs*25	HLA-B44:03	KELDLALDQW	0.9996	0.9947	0.0131	19.3	0.0125	171.54	1/130	1/7086
INDEL	Brain	ZC3HAV1_F145Lfs*49	HLA-A02:01	LLLQSDPFL	0.9773	0.5544	0.2197	17.8	0.2351	37.32	1/130	1/7086
INDEL	Brain	ZC3HAV1_F145Lfs*49	HLA-A02:01	FLCPRYAKV	0.9945	0.6949	0.0441	33.7	0.4483	37.32	1/130	1/7086
INDEL	Brain	ZC3HAV1_F145Lfs*49	HLA-A02:01	VLLLQSDPFL	0.9342	0.5767	1.1249	176.4	1.5222	37.32	1/130	1/7086
INDEL	Brain	RFX3_D681Kfs*18	HLA-B44:03	SEMKNWMTL	0.9938	0.9515	0.0734	31.4	0.0328	7.16	1/130	1/7086
INDEL	Brain	RFX3_D681Kfs*18	HLA-B44:03	SEVESEMKNW	0.9999	0.9706	0.0861	17.1	0.0099	7.16	1/130	1/7086
INDEL	Brain	PEBP1_Q170Rfs*43	HLA-C06:02	YRPSGMTM	0.9758	0.9882	0.3593	454.6	0.148	808.13	1/130	1/7086
INDEL	Brain	PEBP1_Q170Rfs*43	HLA-C16:01	CYRPSGMTM	0.8003	0.972	0.7014	274.2	0.8758	808.13	1/130	1/7086
INDEL	Brain	EVL_P187Hfs*41	HLA-B35:02	HPQSHLHPL	0.966	0.8526	0.2636	92.5	0.0309	20.39	1/130	1/7086
INDEL	Brain	EVL_P187Hfs*41	HLA-C16:01	QSHLHPLGL	0.7983	0.9841	0.2025	150.5	0.5133	20.39	1/130	1/7086
INDEL	Brain	EVL_P187Hfs*41	HLA-C16:01	RAPCQDWPL	0.7751	0.9868	1.1027	353.7	1.0595	20.39	1/130	1/7086
INDEL	Brain	MED23_G382Efs*8	HLA-C03:03	FISEVFRKM	0.9976	0.988	0.0177	126.8	0.4216	8.52	1/130	1/7086
INDEL	Brain	ZNF783_N90Tfs*54	HLA-A11:01	AVEFGTSWR	0.9587	0.6713	1.4611	483.6	1.7208	8.6	1/130	1/7086
INDEL	Brain	ZNF783_N90Tfs*54	HLA-A11:01	GTSGSCGCPR	0.9704	0.8762	0.7151	281	1.2521	8.6	1/130	1/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-C07:02	FHSIPFYSM	0.7018	0.9338	0.2213	223.6	0.1467	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-C07:02	FHSIPFYSM	0.7018	0.9338	0.2213	223.6	0.1467	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	ALRKRGQPL	0.9619	0.6476	0.9381	103	0.3029	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	ALRKRGQPL	0.9619	0.6476	0.9381	103	0.3029	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	SPLALPMGTV	0.9688	0.5609	0.5757	140	0.3737	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	SPLALPMGTV	0.9688	0.5609	0.5757	140	0.3737	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	APAPPSEGCF	0.9924	0.5167	0.3736	225.8	0.5099	25.67	2/130	2/7086
INDEL	Brain	FAM214B_G204Ifs*118	HLA-B07:02	APAPPSEGCF	0.9924	0.5167	0.3736	225.8	0.5099	25.67	2/130	2/7086
INDEL	Brain	SMURF1_N560del	HLA-B35:01	HTFCVEHAF	0.9762	0.8394	0.1072	22.7	0.0927	20.88	1/130	1/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-B35:01	MHYGLKQPY	0.9245	0.8604	1.8454	476.7	0.8552	30.94	1/130	1/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-B18:01	VEKLISLQM	0.9687	0.8625	0.5868	263.6	0.1775	30.94	1/130	1/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	VLLATLSLM	0.9388	0.5934	0.8247	108.2	1.1109	30.94	2/130	2/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	VLLATLSLM	0.9388	0.5934	0.8247	108.2	1.1109	30.94	2/130	2/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	LLWICWEDLV	0.9846	0.6011	1.3915	53	0.6611	30.94	2/130	2/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	LLWICWEDLV	0.9846	0.6011	1.3915	53	0.6611	30.94	2/130	2/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	KLISLQMQHI	0.9935	0.5297	0.4167	56.2	0.6925	30.94	2/130	2/7086
INDEL	Brain	HSDL2_E185Dfs*65	HLA-A02:01	KLISLQMQHI	0.9935	0.5297	0.4167	56.2	0.6925	30.94	2/130	2/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-B35:01	SPRGGLPVF	0.9819	0.8166	0.0166	56.9	0.2153	45.25	1/130	1/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-A02:01	FLEECRLPV	0.9935	0.5918	0.259	11.7	0.1395	45.25	2/130	3/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-A02:01	FLEECRLPV	0.9935	0.5918	0.259	11.7	0.1395	45.25	2/130	3/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-B35:01	LPVGLPGEPL	0.9817	0.9591	0.5637	234.9	0.5502	45.25	1/130	1/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-A02:01	FLEECRLPVGL	0.9938	0.5296	1.224	140	1.3151	45.25	2/130	3/7086
INDEL	Brain	VWF_D2509Gfs*24	HLA-A02:01	FLEECRLPVGL	0.9938	0.5296	1.224	140	1.3151	45.25	2/130	3/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-C07:02	TFLPTPAAM	0.7388	0.9888	0.0267	216.8	0.1419	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-A02:01	FLPTPAAMM	0.9404	0.7848	0.9129	173.4	1.5063	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-A32:01	AMMNFTMRL	0.9727	0.9563	0.1168	8	0.0105	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-C07:02	AMMNFTMRL	0.6186	0.975	0.891	223.1	0.1463	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-A32:01	RLSACTRAL	0.8935	0.9328	0.5058	197.7	0.349	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-A32:01	RALTTSTPW	0.9837	0.9698	0.2856	51.3	0.0905	10.41	1/130	1/7086
INDEL	Brain	C10orf76_S546Afs*25	HLA-C07:02	MRLSACTRAL	0.9915	0.9601	1.1307	435.3	0.2852	10.41	1/130	1/7086
INDEL	Brain	NF1_D2525Afs*23	HLA-C03:04	MSLAWGNLL	0.997	0.9933	0.585	26.5	0.1166	2.96	1/130	1/7086
INDEL	Brain	NF1_D2525Afs*23	HLA-C03:03	MSLAWGNLL	0.997	0.9933	0.5279	26.5	0.1166	2.96	1/130	1/7086
INDEL	Brain	NF1_D2525Afs*23	HLA-A33:03	WGNLLRPTLR	0.9366	0.5705	1.4254	417.4	1.0972	2.96	1/130	1/7086
INDEL	Brain	NF1_M2526Wfs*22	HLA-C03:04	MSLDWGNLL	0.9991	0.9931	0.3851	26.7	0.1174	2.96	1/130	1/7086
INDEL	Brain	NF1_M2526Wfs*22	HLA-C03:03	MSLDWGNLL	0.9991	0.9931	0.3367	26.7	0.1174	2.96	1/130	1/7086
INDEL	Brain	NF1_M2526Wfs*22	HLA-A33:03	WGNLLRPTLR	0.9366	0.5705	1.4254	417.4	1.0972	2.96	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C12:03	STRLPAHLF	0.5712	0.9488	0.2039	377.1	1.2869	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C12:03	KILPNISYL	0.9408	0.9764	0.1072	84.3	0.3863	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C16:01	KILPNISYL	0.985	0.9454	0.1039	35.7	0.1027	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C12:03	YLFPNLSSL	0.9994	0.987	0.0267	5.9	0.0093	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C16:01	YLFPNLSSL	0.9884	0.9803	0.0267	10.8	0.0149	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C12:03	SLHPNLSQV	0.9449	0.9836	0.184	230.6	0.9133	103.19	1/130	1/7086
INDEL	Brain	POLR2A_V1879Afs*35	HLA-C16:01	ISYLFPNLSSL	0.9946	0.9902	1.3695	421.6	1.2193	103.19	1/130	1/7086
INDEL	Brain	PTEN_D153_R159dup	HLA-C07:02	FYGEVRDFY	0.5564	0.9365	0.0299	339.1	0.2247	29.68	1/130	1/7086
INDEL	Brain	GSE1_Q1134delinsHVQTTFCEL	HLA-C16:04	EAYHVQTTF	0.9353	0.9557	0.0084	88.9	0.2539	3.41	1/130	1/7086
INDEL	Brain	GSE1_Q1134delinsHVQTTFCEL	HLA-C16:04	HVQTTFCEL	0.9105	0.957	0.7473	455	1.0843	3.41	1/130	1/7086
INDEL	Brain	GSE1_Q1134delinsHVQTTFCEL	HLA-C16:04	FEAYHVQTTF	0.9965	0.9695	1.2968	60.4	0.1614	3.41	1/130	1/7086
INDEL	Brain	CDKN2C_Q87_T88insFL	HLA-A02:01	FLDTLQFL	0.9984	0.7521	0.7304	32.6	0.4353	49.25	1/130	1/7086
INDEL	Brain	CDKN2C_Q87_T88insFL	HLA-A02:01	FLDTLQFLT	0.9903	0.7197	0.5435	15.4	0.1906	49.25	1/130	1/7086
INDEL	Brain	CDKN2C_Q87_T88insFL	HLA-A02:01	FLTLLEFQA	0.9833	0.6223	0.4096	24.6	0.3376	49.25	1/130	1/7086
INDEL	Brain	CDKN2C_Q87_T88insFL	HLA-A02:01	FLDTLQFLTL	0.9948	0.8031	0.2825	7.8	0.0796	49.25	1/130	1/7086
INDEL	Brain	SLC38A10_E548Nfs*156	HLA-C16:02	RTATTVGSL	0.9161	0.9951	0.4902	239.9	0.2301	29.31	1/130	1/7086
INDEL	Brain	SLC38A10_E548Nfs*156	HLA-C15:02	RTATTVGSL	0.9964	0.9496	0.4048	84.8	0.0733	29.31	1/130	1/7086
INDEL	Brain	SOX21_K9Qfs*126	HLA-C14:02	HAHEGAPRL	0.6585	0.9867	0.7726	264	0.772	212.52	1/130	1/7086
INDEL	Brain	PRDM5_D321Vfs*5	HLA-C07:01	HRKIHEIFV	0.8775	0.7304	0.2825	390.5	0.1372	4.56	1/130	1/7086
INDEL	Brain	EGFR_M1002delinsIIPALWEV	HLA-A02:01	LIIPALWEV	0.9902	0.8062	0.0025	3.2	0.0097	226.42	1/130	1/7086
INDEL	Brain	EGFR_M1002delinsIIPALWEV	HLA-A02:01	ALIIPALWEV	0.9937	0.8077	0.0523	4.1	0.0202	226.42	1/130	1/7086
INDEL	Brain	EGFR_M1002delinsIIPALWEV	HLA-A02:01	ALWEVDEEDM	0.9306	0.7237	0.9014	157.5	1.4246	226.42	1/130	1/7086
INDEL	Brain	TP53_R282Gfs*63	HLA-A02:01	ALSEHCPTT	0.8225	0.6134	0.6911	220.7	1.7511	31.05	1/130	1/7086
INDEL	Brain	TP53_L264Yfs*81	HLA-C07:01	RRNHWMENI	0.9962	0.5777	0.0762	288.1	0.1045	56.02	1/130	1/7086
INDEL	Brain	TP53_L264Yfs*81	HLA-A68:01	TTPAPLPSQR	0.9912	0.8251	0.2227	12.4	0.1367	56.02	1/130	1/7086
INDEL	Brain	ZNF71_P25Tfs*53	HLA-B40:01	EEWCQGSWL	0.9522	0.5422	1.3108	227.1	0.438	5.41	1/130	1/7086
INDEL	Brain	ZNF71_P25Tfs*53	HLA-A68:01	QLAREAAGR	0.8964	0.5504	0.897	287	1.6874	5.41	1/130	1/7086
INDEL	Brain	SCAF1_V1267_R1268insVLTLCF	HLA-B58:01	VSNLVVLTL	0.9912	0.9063	0.0396	92.8	0.4529	58.26	1/130	1/7086
INDEL	Brain	SCAF1_V1267_R1268insVLTLCF	HLA-A02:01	LTLCFRAYV	0.9669	0.6154	0.9495	98.2	1.0466	58.26	1/130	1/7086
INDEL	Brain	SCAF1_V1267_R1268insVLTLCF	HLA-B58:01	KVSNLVVLTL	0.9944	0.9364	1.9404	84.9	0.4254	58.26	1/130	1/7086
INDEL	Brain	SCAF1_V1267_R1268insVLTLCF	HLA-C07:01	FRAYVQRYRY	0.9982	0.5343	0.7172	492	0.1678	58.26	1/130	1/7086
INDEL	Brain	NF1_S2064Lfs*7	HLA-A32:01	KIIDKTCLL	0.9883	0.8695	0.0201	253.8	0.4322	1.34	1/130	1/7086
INDEL	Brain	UBE3C_V835dup	HLA-C12:03	ALYENMLVV	0.9184	0.966	0.0618	135	0.5907	15.28	1/130	1/7086
INDEL	Brain	UBE3C_V835dup	HLA-B18:01	YENMLVVEL	0.9863	0.9358	0.2636	36.5	0.0252	15.28	1/130	1/7086
INDEL	Brain	RAI14_D173Ifs*32	HLA-B41:01	SEICHFLLI	0.5864	0.8604	0.1734	12	0.0075	9.38	1/130	1/7086
INDEL	Brain	RAI14_D173Ifs*32	HLA-B41:01	EELLSCWPV	0.6573	0.9719	0.678	51.4	0.0465	9.38	1/130	1/7086
INDEL	Brain	RAI14_D173Ifs*32	HLA-B41:01	SEICHFLLIM	0.7318	0.8463	0.8698	91.6	0.1142	9.38	1/130	1/7086
INDEL	Brain	RAI14_D173Ifs*32	HLA-B41:01	VEELLSCWPV	0.624	0.9214	1.1249	136.7	0.1885	9.38	1/130	1/7086
INDEL	Brain	HEXIM1_P34Qfs*52	HLA-B08:01	HLPCRPRPV	0.9354	0.5502	1.2301	261.9	0.45	54.61	1/130	1/7086
INDEL	Brain	HEXIM1_P34Qfs*52	HLA-B27:05	RRSGCPRRTV	0.999	0.566	0.8931	274.8	0.7965	54.61	1/130	1/7086
INDEL	Brain	HEXIM1_P34Qfs*52	HLA-B27:05	RRTVGGNRER	0.9993	0.599	0.7573	302.1	0.8558	54.61	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-B27:05	WRIHSKEKL	0.9992	0.9377	0.5231	139.8	0.4605	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-C03:03	FARSVSEAI	0.9804	0.9816	0.3639	14.7	0.0597	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-C02:02	FARSVSEAI	0.6299	0.976	0.4675	239.8	0.136	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-C03:03	RSVSEAIPV	0.9383	0.9925	1.9828	230.2	0.6156	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-C03:03	KSVDESLAI	0.9938	0.9899	0.5706	115.1	0.3954	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-A02:01	SLAISHTTV	0.9819	0.5324	0.2071	144.3	1.3443	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-B27:05	WRIHSKEKLL	0.9996	0.8665	0.9432	131.9	0.4362	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-B15:01	SQTSLCMKEY	0.9996	0.7361	0.6079	49.1	0.2455	1.73	1/130	1/7086
INDEL	Brain	ZNF337_P684Lfs*49	HLA-B27:05	WRIHSKEKLLF	1	0.8093	0.4986	160.5	0.5192	1.73	1/130	1/7086
INDEL	Brain	SRCAP_D2661Mfs*17	HLA-A26:01	ELPPSAASM	0.9886	0.9241	1.4148	401.3	0.1759	43.06	1/130	1/7086
INDEL	Brain	SRCAP_D2661Mfs*17	HLA-B38:01	SHFRSHWRL	0.9748	0.8992	0.1072	71.3	0.0099	43.06	1/130	1/7086
INDEL	Brain	REPS1_Q416Rfs*19	HLA-C12:03	RAVSSGRHL	0.739	0.9699	0.5077	100.4	0.4508	10.7	2/130	2/7086
INDEL	Brain	REPS1_Q416Rfs*19	HLA-C12:03	RAVSSGRHL	0.739	0.9699	0.5077	100.4	0.4508	10.7	2/130	2/7086
INDEL	Brain	REPS1_Q416Rfs*19	HLA-C12:03	SGRHLVNAL	0.9671	0.979	0.6556	197.9	0.8167	10.7	2/130	2/7086
INDEL	Brain	REPS1_Q416Rfs*19	HLA-C12:03	SGRHLVNAL	0.9671	0.979	0.6556	197.9	0.8167	10.7	2/130	2/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	MQLPFLAV	0.9826	0.659	1.9269	61.6	0.7464	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-B58:01	LAAQEGPLF	0.9564	0.9862	0.6352	169.4	0.6851	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-C03:02	LAAQEGPLF	0.9981	0.9858	0.5128	41.8	0.2049	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	AQEGPLFAV	0.9553	0.855	0.3837	14.2	0.1718	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-B58:01	FAVPMQLPF	0.937	0.8953	0.3717	25.5	0.1708	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-C03:02	FAVPMQLPF	0.9993	0.9748	0.1383	3.2	0.0067	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	AVPMQLPFL	0.801	0.5603	0.3529	135.6	1.3563	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	MQLPFLAVL	0.947	0.7786	0.2712	9.2	0.0911	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-C03:02	MQLPFLAVL	0.9483	0.9844	0.8444	33.8	0.1598	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	AAQEGPLFAV	0.8999	0.8165	0.511	48.1	0.5984	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-A02:06	FAVPMQLPFL	0.9466	0.5844	0.193	55	0.6723	156.62	1/130	1/7086
INDEL	Brain	APC2_S1066Ffs*24	HLA-C03:02	FAVPMQLPFL	0.9992	0.9762	0.1775	37.5	0.1789	156.62	1/130	1/7086
INDEL	Brain	GGA1_K140_Q142del	HLA-B41:01	AEAYQMLGIV	0.7008	0.994	0.6875	161.5	0.2314	25.37	1/130	1/7086
INDEL	Brain	QKI_R256Kfs*18	HLA-C07:02	YRPLSCQTEL	0.9783	0.8819	0.5686	439.2	0.2875	54.51	1/130	1/7086
INDEL	Brain	AKR7A3_D213Efs*51	HLA-C03:04	IATGRSTTL	0.9995	0.9641	0.2335	8.2	0.03	1.15	1/130	1/7086
INDEL	Brain	AKR7A3_D213Efs*51	HLA-A32:01	STTLRALPW	0.9785	0.9674	0.4033	275.3	0.4634	1.15	1/130	1/7086
INDEL	Brain	AKR7A3_D213Efs*51	HLA-A32:01	RSTTLRALPW	0.988	0.9577	1.182	274.3	0.462	1.15	1/130	1/7086
INDEL	Brain	RNF168_R57Gfs*34	HLA-B15:07	GIVVDSVPY	0.9569	0.6256	1.1421	384.9	0.9661	17.12	1/130	1/7086
INDEL	Brain	RNF168_R57Gfs*34	HLA-C03:04	TVDDNSKTL	0.9983	0.9842	0.0848	284.4	0.7	17.12	1/130	1/7086
INDEL	Brain	RNF168_R57Gfs*34	HLA-C05:01	TVDDNSKTL	0.9999	0.8782	0.0452	168.1	0.0829	17.12	1/130	1/7086
INDEL	Brain	DOCK11_D1058Ifs*25	HLA-C03:04	FAITNITF	1	0.9865	0.1149	127.2	0.4224	3.46	1/130	1/7086
INDEL	Brain	DOCK11_D1058Ifs*25	HLA-C03:04	YISGFSPKI	0.9857	0.9856	0.5815	369.5	0.8167	3.46	1/130	1/7086
INDEL	Brain	DOCK11_D1058Ifs*25	HLA-C03:04	FAITNITFL	0.9996	0.9856	0.0045	3.5	0.0092	3.46	1/130	1/7086
INDEL	Brain	DOCK11_D1058Ifs*25	HLA-A32:01	KQFAITNITF	0.9932	0.9465	0.0109	19.4	0.0324	3.46	1/130	1/7086
INDEL	Brain	DOCK11_D1058Ifs*25	HLA-B15:07	KQFAITNITF	0.9987	0.8311	0.0096	19.1	0.0147	3.46	1/130	1/7086
INDEL	Brain	INPPL1_K515Sfs*16	HLA-C12:03	LVSQSTRTV	0.8306	0.9782	0.7967	113.2	0.498	17.46	1/130	1/7086
INDEL	Brain	INPPL1_K515Sfs*16	HLA-C12:03	QSTRTVSAM	0.9596	0.9634	1.1421	298.5	1.0844	17.46	1/130	1/7086
INDEL	Brain	INPPL1_K515Sfs*16	HLA-C12:03	VSAMSVRPV	0.9673	0.973	0.9663	97.5	0.4396	17.46	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-C12:03	VQTQWMNVL	0.9112	0.9715	1.7839	394.6	1.3273	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-C12:03	TQWMNVLTF	0.6716	0.9658	0.9993	393	1.324	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-C12:03	LTFLWKNTL	0.905	0.9944	0.1212	35.8	0.151	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-A02:01	FLWKNTLHP	0.9015	0.8073	1.2627	230	1.7949	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-A02:01	TLHPVVWTT	0.9136	0.66	0.2543	84	0.9418	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-A02:01	FLWKNTLHPV	0.9973	0.7357	0.2367	2.6	0.0079	25.86	1/130	1/7086
INDEL	Brain	SESN3_A52Tfs*27	HLA-A02:01	FLWKNTLHPVV	0.9902	0.5758	0.8378	8.6	0.0962	25.86	1/130	1/7086
INDEL	Brain	BMP1_N614Qfs*21	HLA-B41:01	KEYPPQQEL	0.6135	0.6861	0.0481	300.3	0.4316	24.51	1/130	1/7086
INDEL	Brain	BMP1_N614Qfs*21	HLA-A02:06	LAAGGPHPV	0.9293	0.7849	0.4048	70.6	0.8384	24.51	1/130	1/7086
INDEL	Brain	BMP1_N614Qfs*21	HLA-C03:04	LAAGGPHPV	0.9957	0.9885	0.4475	15.9	0.0652	24.51	1/130	1/7086
INDEL	Brain	BMP1_N614Qfs*21	HLA-C03:04	HPVPHLPAV	0.9182	0.9872	0.1383	312.6	0.7409	24.51	1/130	1/7086
INDEL	Brain	PHLPP1_T1236Nfs*38	HLA-B41:01	KETWNCWAEA	0.5806	0.8815	0.6655	248.3	0.3643	16.83	1/130	1/7086
INDEL	Brain	PHLPP1_T1236Nfs*38	HLA-B41:01	AEAWWCRCPL	0.7368	0.9558	0.9357	140.2	0.1968	16.83	1/130	1/7086
INDEL	Brain	TBC1D23_I157Nfs*23	HLA-A02:01	GLFPERETI	0.9131	0.6772	0.0762	253.9	1.9182	14.06	1/130	1/7086
INDEL	Brain	TBC1D23_I157Nfs*23	HLA-A66:01	ETISSLQVA	0.998	0.6014	0.7376	300.5	0.1136	14.06	1/130	1/7086
INDEL	Brain	TBC1D23_I157Nfs*23	HLA-C12:03	SSLQVAHPI	0.7704	0.9571	0.9381	232.2	0.9175	14.06	1/130	1/7086
INDEL	Brain	RB1_T342Lfs*7	HLA-A02:01	FLDHDKLFRL	0.9967	0.5793	0.0835	7.8	0.08	25.81	1/130	1/7086
INDEL	Brain	RB1_T342Lfs*7	HLA-A02:01	FLDHDKLFRLI	0.995	0.511	1.5029	222	1.7573	25.81	1/130	1/7086
INDEL	Brain	EXPH5_S1001Tfs*40	HLA-C07:02	KAIPKFLNL	0.996	0.9439	0.0671	458	0.2983	2.74	2/130	2/7086
INDEL	Brain	EXPH5_S1001Tfs*40	HLA-C07:02	KAIPKFLNL	0.996	0.9439	0.0671	458	0.2983	2.74	2/130	2/7086
INDEL	Brain	EXPH5_S1001Tfs*40	HLA-B07:02	VPTSDHRTSL	0.9983	0.5366	0.0875	10.3	0.0273	2.74	2/130	2/7086
INDEL	Brain	EXPH5_S1001Tfs*40	HLA-B07:02	VPTSDHRTSL	0.9983	0.5366	0.0875	10.3	0.0273	2.74	2/130	2/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B07:02	PAQPRCSL	0.9738	0.6108	1.2899	394.7	0.7274	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B27:05	GRSPWNSSL	0.9992	0.8977	0.1072	74.1	0.2462	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-C07:02	GRSPWNSSL	0.8383	0.9558	0.0861	292.7	0.1927	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B07:02	TPAQPRCSL	0.9998	0.6725	0.0073	4.6	0.0085	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B07:02	KPAWRASSP	0.9906	0.5382	0.8677	197.8	0.4684	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B27:05	LGRSPWNSSL	0.984	0.8909	1.4611	406.3	1.0671	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B27:05	GRSPWNSSLF	0.9999	0.8906	0.3914	92.8	0.3076	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B07:02	TPAQPRCSLM	0.9994	0.6364	0.4196	16.9	0.0577	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B27:05	GRSPWNSSLFK	0.9999	0.9023	0.2684	64.4	0.213	59.23	1/130	1/7086
INDEL	Brain	NCAM1_Q497Pfs*83	HLA-B07:02	MPRKPAWRASS	0.9995	0.5001	1.3768	227.7	0.5131	59.23	1/130	1/7086
INDEL	Brain	TIA1_H54Mfs*10	HLA-C03:03	FVEFMSIVM	0.987	0.9937	1.1249	133	0.435	28.38	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-B07:02	RAPSRIPAL	0.9992	0.5142	0.2745	208.1	0.4835	33.95	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-C07:02	RAPSRIPAL	0.9754	0.9537	0.1994	271.9	0.1782	33.95	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-C03:03	RAPSRIPAL	0.9938	0.9804	0.1596	48.7	0.2058	33.95	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-C03:03	IPALGKAAL	0.9886	0.9617	0.4529	494.3	1.004	33.95	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-C07:02	WRAPSRIPAL	0.9978	0.9786	0.2745	222.1	0.1457	33.95	1/130	1/7086
INDEL	Brain	RNF19B_L476Pfs*15	HLA-A03:01	RIPALGKAALK	0.999	0.5532	0.1498	91.6	0.34	33.95	1/130	1/7086
INDEL	Brain	TP53_G334_R337del	HLA-C03:03	FTLQIRFEM	0.9926	0.9868	0.7456	55.5	0.2314	49.41	1/130	1/7086
INDEL	Brain	TP53_G334_R337del	HLA-C07:02	IRFEMFREL	0.9177	0.9142	0.0267	30.5	0.0111	49.41	1/130	1/7086
INDEL	Brain	ANKRD17_A2356Hfs*23	HLA-B15:01	QMYGPGHPL	0.9964	0.9672	0.4018	119.9	0.6098	25.45	1/130	1/7086
INDEL	Brain	ANKRD17_A2356Hfs*23	HLA-C03:04	QMYGPGHPL	0.9948	0.994	0.3837	47.8	0.2021	25.45	1/130	1/7086
INDEL	Brain	ANKRD17_A2356Hfs*23	HLA-B15:01	LLTLTDNIF	0.9515	0.8295	1.6762	162.5	0.7799	25.45	1/130	1/7086
INDEL	Brain	ANKRD17_A2356Hfs*23	HLA-B15:01	GQMYGPGHPL	0.9979	0.947	0.8271	102.8	0.5382	25.45	1/130	1/7086
INDEL	Brain	ABCA3_D882Vfs*112	HLA-B15:01	AQHWARPAL	0.9968	0.9694	0.0495	229.2	1.0117	65.6	1/130	1/7086
INDEL	Brain	ABCA3_D882Vfs*112	HLA-C03:04	WARPALPAI	0.9833	0.9917	0.1718	25.4	0.1117	65.6	1/130	1/7086
INDEL	Brain	ABCA3_D882Vfs*112	HLA-C07:01	VRQNRRALL	0.986	0.578	0.3925	175.3	0.0673	65.6	1/130	1/7086
INDEL	Brain	ABCA3_D882Vfs*112	HLA-C03:04	RALLSSRDL	0.9384	0.9844	1.2933	399.4	0.859	65.6	1/130	1/7086
INDEL	Brain	ABCA3_D882Vfs*112	HLA-C03:04	WARPALPAIL	0.9931	0.9894	0.6949	292.5	0.7121	65.6	1/130	1/7086
INDEL	Brain	NCDN_S226Rfs*47	HLA-C07:01	LRISRKLRM	0.9931	0.5663	0.5058	72	0.023	32.51	1/130	1/7086
INDEL	Brain	NCDN_S226Rfs*47	HLA-A03:02	ASCCPSFCPR	0.8571	0.6466	1.3951	188.2	0.546	32.51	1/130	1/7086
INDEL	Brain	GALNT7_N531Mfs*29	HLA-C03:03	EASKLLTAL	0.9994	0.9695	0.4263	207.2	0.5763	21.76	1/130	1/7086
INDEL	Brain	GALNT7_N531Mfs*29	HLA-C03:03	IAWEKQMEAL	0.9998	0.9884	0.3974	484.7	0.9908	21.76	1/130	1/7086
INDEL	Brain	DLL1_D701Efs*20	HLA-A11:01	TSRCTSYPR	0.9396	0.533	1.7557	375.2	1.4959	20.06	1/130	1/7086
INDEL	Brain	PIK3R1_V181Ffs*26	HLA-A02:01	EMIDVHFWL	0.961	0.5242	0.1566	31.1	0.4166	11.39	1/130	1/7086
INDEL	Brain	PIK3R1_V181Ffs*26	HLA-B35:01	LSNAISWTY	0.9699	0.8126	0.2526	27.8	0.1111	11.39	1/130	1/7086
INDEL	Brain	PIK3R1_V181Ffs*26	HLA-A02:01	ILSFQQPFTV	0.9882	0.817	0.4548	17.3	0.2247	11.39	1/130	1/7086
INDEL	Brain	ARID1B_L2036_D2037insTEKLIKIVFF	HLA-A02:01	ILTEKLIKI	0.9943	0.5093	0.0121	29.4	0.395	17.35	1/130	1/7086
INDEL	Brain	ARID1B_L2036_D2037insTEKLIKIVFF	HLA-C04:01	FFDGLLHWM	0.9973	0.8443	0.1734	215.7	0.0086	17.35	1/130	1/7086
INDEL	Brain	AKAP9_A2700Vfs*22	HLA-A11:01	ALRAESVVPK	0.9789	0.5375	0.2165	60	0.367	8.82	1/130	1/7086
INDEL	Brain	SRCAP_T2512Rfs*9	HLA-C07:02	HRLQPKPVL	0.9483	0.9772	0.0932	228.5	0.15	31.44	2/130	2/7086
INDEL	Brain	SRCAP_T2512Rfs*9	HLA-C07:02	HRLQPKPVL	0.9483	0.9772	0.0932	228.5	0.15	31.44	2/130	2/7086
