Type	Tissue	Mutation	HLA	Peptide	Deep_bind	Deep_imm	MHCf_rank (%)	Net4_aff (nM)	Net4_rank (%)	TPM	Frequency in the tissue	Frequency in all samples
Fusion	Cervix	CDC27--C17orf53	HLA-C16:04	YMQAALKQL	0.9642	0.9906	0.9621	435.7	1.0512	NA	1/139	1/4234
Fusion	Cervix	RUNDC1--RGS9	HLA-C16:04	KTFSRSKWM	0.6321	0.9375	1.6471	216.2	0.5953	NA	1/139	1/4234
Fusion	Cervix	PPM1D--C17orf64	HLA-B58:01	RSREPPAW	0.9962	0.9697	0.2165	330.4	1.109	NA	1/139	1/4234
Fusion	Cervix	PPM1D--C17orf64	HLA-A33:03	CAGEVLAGR	0.9203	0.6036	0.5231	122.9	0.4528	NA	1/139	1/4234
Fusion	Cervix	PPM1D--C17orf64	HLA-A33:03	EVLAGRPGR	0.9509	0.5149	0.0177	49	0.1838	NA	1/139	1/4234
Fusion	Cervix	PPM1D--C17orf64	HLA-C03:02	QSAQALPCM	0.9651	0.9738	1.6818	456.8	1.3752	NA	1/139	1/4234
Fusion	Cervix	MICALL2--PSMG3	HLA-B58:02	LSSMSLQRTW	0.9996	0.9845	0.3787	211.8	0.0097	NA	1/139	1/4234
Fusion	Cervix	MICALL2--PSMG3	HLA-C06:02	HRPDLILSSM	0.9736	0.9704	0.1317	477.3	0.1553	NA	1/139	1/4234
Fusion	Cervix	MICALL2--PSMG3	HLA-B58:02	SSMSLQRTW	0.9994	0.9761	0.0037	160	0.0092	NA	1/139	1/4234
Fusion	Cervix	MICALL2--PSMG3	HLA-C07:01	HRHRPDLIL	0.9943	0.5881	0.281	110.8	0.0431	NA	1/139	1/4234
Fusion	Cervix	COL22A1--ZFAT	HLA-B44:02	GEMGPPGIPEF	0.9998	0.8045	0.1369	302.3	0.3128	NA	1/139	1/4234
Fusion	Cervix	COL22A1--ZFAT	HLA-C03:03	MGPPGIPEF	0.9942	0.9957	0.262	390.2	0.8464	NA	1/139	1/4234
Fusion	Cervix	SIPA1--RHOD	HLA-B07:02	RPRRATPPRC	0.9914	0.748	0.7329	64.4	0.2095	NA	1/139	1/4234
Fusion	Cervix	SIPA1--RHOD	HLA-B07:02	RPRRATPPRCL	0.9999	0.7403	0.0835	6.3	0.0109	NA	1/139	1/4234
Fusion	Cervix	SIPA1--RHOD	HLA-B07:02	RPRRATPP	0.9993	0.5877	1.8454	238.1	0.5301	NA	1/139	1/4234
Fusion	Cervix	SIPA1--RHOD	HLA-C07:02	RRATPPRCL	0.8131	0.9781	0.1227	325.4	0.2154	NA	1/139	1/4234
Fusion	Cervix	LEXM--TTC4	HLA-C07:01	FRGLTGVYF	0.9847	0.7804	0.1898	414.6	0.1437	NA	1/139	1/4234
Fusion	Cervix	LEXM--TTC4	HLA-C07:01	VRFRGLTGV	0.8832	0.5974	0.2778	267.7	0.0971	NA	1/139	1/4234
Fusion	Cervix	NAALADL2--EPHB3	HLA-C15:02	ITQPSRQLV	0.9995	0.7395	0.3057	154.7	0.1667	NA	1/139	1/4234
Fusion	Cervix	NAALADL2--EPHB3	HLA-C15:02	SSVRGLHLL	0.9995	0.9182	0.3268	284.6	0.3087	NA	1/139	1/4234
Fusion	Cervix	EMC10--ASPDH	HLA-B35:01	YPAASSPPG	0.9406	0.6057	1.6762	47.2	0.1827	NA	1/139	1/4234
Fusion	Cervix	FARSA--EFCAB6	HLA-A30:01	RSRWRINKPK	0.9968	0.8905	1.0547	6.6	0.0132	NA	1/139	1/4234
Fusion	Cervix	FARSA--EFCAB6	HLA-A30:01	RWRINKPKIPK	0.9945	0.8608	1.7092	114.9	0.5669	NA	1/139	1/4234
Fusion	Cervix	FARSA--EFCAB6	HLA-A30:01	RINKPKIPK	0.9991	0.8231	0.0073	18.8	0.0752	NA	1/139	1/4234
Fusion	Cervix	FARSA--EFCAB6	HLA-A30:01	RSRWRINKP	0.9926	0.9414	1.8072	60.5	0.3105	NA	1/139	1/4234
Fusion	Cervix	INTS6--BZW2	HLA-A02:01	HLSRGLMRLV	0.824	0.6922	1.8985	245.5	1.8768	NA	1/139	1/4234
Fusion	Cervix	INTS6--BZW2	HLA-A02:01	HLSRGLMRL	0.8566	0.624	0.6429	230.3	1.7962	NA	1/139	1/4234
Fusion	Cervix	INTS6--BZW2	HLA-C07:02	MRLVMTLKL	0.9276	0.9625	0.2428	100.9	0.0551	NA	1/139	1/4234
Fusion	Cervix	INTS6--BZW2	HLA-C07:02	SRGLMRLVM	0.982	0.9109	0.1527	418.2	0.275	NA	1/139	1/4234
Fusion	Cervix	CRCP--ADAM22	HLA-B44:03	MEVDLLSSEY	0.9992	0.8951	0.0995	23.6	0.018	NA	1/139	1/4234
Fusion	Cervix	SOGA1--RBL1	HLA-B07:02	RPREMDAPPL	0.999	0.5043	0.193	3.4	0.0069	NA	1/139	1/4234
Fusion	Cervix	SOGA1--RBL1	HLA-B07:02	RPREMDAPPLS	0.9998	0.5599	1.2796	171.3	0.4258	NA	1/139	1/4234
Fusion	Cervix	TBC1D17--PRR12	HLA-A02:01	RLWELALQT	0.9827	0.7807	0.3657	42.1	0.5446	NA	1/139	1/4234
Fusion	Cervix	WEE1--CHRNA3	HLA-B15:01	SLLQNAVGDF	0.9955	0.759	1.8911	359.6	1.3964	NA	1/139	1/4234
Fusion	Cervix	WEE1--CHRNA3	HLA-B15:01	LLQNAVGDF	0.986	0.64	1.2661	72.7	0.3903	NA	1/139	1/4234
Fusion	Cervix	ZNF384--CDCA3	HLA-B15:01	CSRAYTSVF	0.9917	0.9106	0.6837	26.8	0.1229	NA	1/139	1/4234
Fusion	Cervix	KIZ--SLPI	HLA-B53:01	LTLVASNAW	0.7983	0.77	0.8127	192.2	0.2198	NA	1/139	1/4234
Fusion	Cervix	KIZ--SLPI	HLA-C03:04	LVASNAWIL	0.9809	0.9937	1.3768	163.5	0.4929	NA	1/139	1/4234
Fusion	Cervix	KIZ--SLPI	HLA-C03:04	VASNAWILL	0.999	0.992	0.3514	83.7	0.3224	NA	1/139	1/4234
Fusion	Cervix	WARS2--TMEM87B	HLA-C03:04	FQQSQFLFL	0.915	0.9896	0.7594	409.3	0.8723	NA	1/139	1/4234
Fusion	Cervix	WARS2--TMEM87B	HLA-C03:04	ILFQQSQFL	0.9154	0.9917	1.0891	403.5	0.8645	NA	1/139	1/4234
Fusion	Cervix	OTUD3--HES2	HLA-B27:05	LRTASYSTSR	0.9997	0.7756	1.9202	381.1	1.0204	NA	1/139	1/4234
Fusion	Cervix	OTUD3--HES2	HLA-B27:05	SRLLSSPQL	0.9999	0.8993	0.2352	89.8	0.2972	NA	1/139	1/4234
Fusion	Cervix	OTUD3--HES2	HLA-B39:01	SRLLSSPQL	0.9983	0.9419	0.3199	322.1	0.339	NA	1/139	1/4234
Fusion	Cervix	OTUD3--HES2	HLA-C07:02	SRLLSSPQL	0.8557	0.9634	0.2197	316.1	0.2089	NA	1/139	1/4234
Fusion	Cervix	RBM15--ZYG11B	HLA-B27:05	KRFGDLVVTGM	1	0.6088	0.057	53.7	0.1745	NA	1/139	1/4234
Fusion	Cervix	PLCG2--CMIP	HLA-A02:01	LLQDQKIPAL	0.9837	0.7144	0.3137	127.8	1.2397	NA	1/139	1/4234
Fusion	Cervix	PLCG2--CMIP	HLA-A02:01	LLLQDQKIPAL	0.9976	0.6565	0.8515	189.4	1.5896	NA	1/139	1/4234
Fusion	Cervix	PLCG2--CMIP	HLA-C05:01	LQDQKIPAL	0.9999	0.9646	0.0808	280.3	0.1236	NA	1/139	1/4234
Fusion	Cervix	HNRNPUL1--BRSK1	HLA-A29:02	VIGCFAHAQY	0.9983	0.5562	0.9357	144.4	0.5305	NA	1/139	1/4234
Fusion	Cervix	BIRC2--TMEM123	HLA-C03:06	MASETLQHV	0.9993	0.9843	0.3851	49.2	0.1523	NA	1/139	1/4234
Fusion	Cervix	BIRC2--TMEM123	HLA-C16:01	MASETLQHV	0.9808	0.9794	0.4367	146.7	0.501	NA	1/139	1/4234
Fusion	Cervix	USP25--CYYR1	HLA-C03:06	HSVLHPLLI	0.9632	0.9877	0.0396	149	0.4101	NA	1/139	1/4234
Fusion	Cervix	USP25--CYYR1	HLA-C16:01	HSVLHPLLI	0.8156	0.9754	0.0396	169.6	0.572	NA	1/139	1/4234
Fusion	Cervix	USP25--CYYR1	HLA-C16:01	SVLHPLLIL	0.9394	0.9643	0.4614	159.8	0.5429	NA	1/139	1/4234
Fusion	Cervix	USP25--CYYR1	HLA-C16:01	VQHSVLHPL	0.9401	0.9685	1.0069	248.5	0.8039	NA	1/139	1/4234
Fusion	Cervix	PLEKHH2--THADA	HLA-A02:01	LLAEKVKEI	0.9951	0.6758	0.0452	77.2	0.8854	NA	1/139	1/4234
Fusion	Cervix	CHAF1B--DOPEY2	HLA-C12:03	KTLRKSVAL	0.9135	0.9551	0.6635	286.7	1.0539	NA	1/139	1/4234
Fusion	Cervix	KMT2C--DNAH11	HLA-C12:03	AVVSGSTEV	0.8936	0.985	0.793	253.7	0.9696	NA	1/139	1/4234
Fusion	Cervix	KMT2C--DNAH11	HLA-C12:03	GSTEVSIPL	0.986	0.9845	0.8833	445.6	1.4362	NA	1/139	1/4234
Fusion	Cervix	PMF1--RAB25	HLA-A24:02	RYYRGAVGALL	0.9983	0.7333	1.1501	156.7	0.298	NA	1/139	1/4234
Fusion	Cervix	TMEM54--TRIM62	HLA-C12:03	IVRELKDQL	0.8433	0.9681	0.704	472.7	1.4928	NA	1/139	1/4234
Fusion	Cervix	TMEM54--TRIM62	HLA-C12:03	VTSAIVREL	0.9971	0.9783	0.0037	84.9	0.3882	NA	1/139	1/4234
Fusion	Cervix	PGD--PEX14	HLA-A32:01	KLIATAVKF	0.9972	0.8995	0.0315	19	0.0318	NA	1/139	1/4234
Fusion	Cervix	WDHD1--DLGAP5	HLA-A02:01	SLLNATFLI	0.9833	0.5301	0.0919	5.5	0.0425	NA	1/139	1/4234
Fusion	Cervix	WDHD1--DLGAP5	HLA-C16:01	KVSLLNATF	0.7995	0.9912	0.4614	132.1	0.4525	NA	1/139	1/4234
Fusion	Cervix	WDHD1--DLGAP5	HLA-C16:01	VSLLNATFL	0.7506	0.9859	0.8562	109.7	0.3774	NA	1/139	1/4234
Fusion	Cervix	WDHD1--DLGAP5	HLA-C16:01	YLIIKVSLL	0.8595	0.9531	0.296	356.8	1.0654	NA	1/139	1/4234
Fusion	Cervix	CDH8--RFX1	HLA-B55:01	APATTRPQA	0.9195	0.6165	0.051	233.7	0.0796	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	APPSPWRRPC	0.8938	0.5958	1.0069	303.5	0.6228	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	GPPAPRAVVV	0.9892	0.7694	0.4967	355.8	0.6851	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	APRAVVVAARV	0.9997	0.7734	0.5264	183.1	0.4455	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	APRAVVVA	0.9998	0.6807	0.5077	206.4	0.4811	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	APRAVVVAA	0.9996	0.7028	0.0045	14.1	0.0433	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	GPPAPRAVV	0.9987	0.7889	0.4078	83	0.2569	NA	1/139	1/4234
Fusion	Cervix	SMARCA4--CARM1	HLA-B07:02	SPWRRPCPS	0.9956	0.7078	0.8317	376.6	0.7079	NA	1/139	1/4234
Fusion	Cervix	NOC2L--C1orf159	HLA-C07:02	SRKRLLQAL	0.9375	0.9498	0.5245	309.5	0.2042	NA	1/139	1/4234
Fusion	Cervix	RIC1--PFN2	HLA-C07:02	IWYSRPIEI	0.8978	0.8888	0.0427	209.2	0.1365	NA	1/139	1/4234
Fusion	Cervix	PHF21A--TMEM123	HLA-A02:01	TIQMKLPTV	0.9149	0.5947	0.538	228.6	1.7882	NA	1/139	1/4234
Fusion	Cervix	PHF21A--TMEM123	HLA-B27:02	QRLSNMCLL	0.9997	0.5019	0.7554	432.1	0.1661	NA	1/139	1/4234
Fusion	Cervix	CCT3--IQGAP3	HLA-A32:01	CMHPTLLSV	0.5503	0.9014	0.8629	480.9	0.7361	NA	2/139	2/4234
Fusion	Cervix	ALDH3B1--PC	HLA-B08:01	DQMLKFRTV	0.995	0.8517	0.0979	42.7	0.0715	NA	1/139	1/4234
Fusion	Cervix	SAFB--C19orf70	HLA-B07:02	GPLQGPRVL	0.9992	0.5281	0.1596	50.2	0.1743	NA	1/139	1/4234
Fusion	Cervix	SAFB--C19orf70	HLA-B07:02	GPRVLQGGL	0.9991	0.7014	0.4883	18.1	0.0625	NA	1/139	1/4234
Fusion	Cervix	CCDC113--CPNE2	HLA-B13:02	LQVEEQYFI	0.75	0.8776	0.2165	449.4	0.069	NA	1/139	1/4234
Fusion	Cervix	CYP4F11--CIB3	HLA-A32:01	LILTTTTTF	0.8816	0.8424	0.4675	223.7	0.387	NA	1/139	1/4234
Fusion	Cervix	CYP4F11--CIB3	HLA-A32:01	TTTFVRGTW	0.9164	0.9368	0.0762	306.1	0.5046	NA	1/139	1/4234
Fusion	Cervix	MYH11--YME1L1	HLA-A30:01	KVHKLQVTV	0.9988	0.7915	0.1718	30.5	0.1521	NA	1/139	1/4234
Fusion	Cervix	MYH11--YME1L1	HLA-A32:01	KVHKLQVTV	0.9791	0.9147	0.1212	38	0.0687	NA	1/139	1/4234
Fusion	Cervix	MCM6--RAB3GAP1	HLA-A02:01	SLFPTIHGDFV	0.9927	0.526	0.148	21	0.2873	NA	1/139	1/4234
Fusion	Cervix	MCM6--RAB3GAP1	HLA-C05:01	HGDFVTEFF	0.9996	0.9828	0.033	488.5	0.1886	NA	1/139	1/4234
Fusion	Cervix	HNRNPLL--NFATC3	HLA-B42:01	NPLYPITVLL	0.7078	0.5432	0.6117	48.6	0.2444	NA	1/139	1/4234
Fusion	Cervix	HNRNPLL--NFATC3	HLA-B42:01	NPLYPITVL	0.8178	0.5767	0.0396	20.6	0.0967	NA	1/139	1/4234
Fusion	Cervix	ITGA2--GPX8	HLA-A02:01	ALSQAFMPL	0.9845	0.5018	0.2482	34.1	0.4524	NA	1/139	1/4234
Fusion	Cervix	ITGA2--GPX8	HLA-A02:01	LLVLALSQA	0.8495	0.5347	0.8149	237.4	1.834	NA	1/139	1/4234
Fusion	Cervix	FN3K--MYO16	HLA-C12:03	WSRLQVSQL	0.9415	0.9703	1.3	114.6	0.504	NA	1/139	1/4234
Fusion	Cervix	PDPK1--UBALD1	HLA-C02:02	RTTSQLTAL	0.9544	0.9478	0.3514	399.6	0.2621	NA	1/139	1/4234
Fusion	Cervix	DOCK4--TPH2	HLA-B45:01	TEHEKYGVVV	0.9925	0.8601	0.1656	452.8	0.4129	NA	1/139	1/4234
Fusion	Cervix	FAT1--NTRK3	HLA-B57:01	ASTLMAPSF	0.9619	0.9794	0.5491	368	0.5931	NA	1/139	1/4234
Fusion	Cervix	FAT1--NTRK3	HLA-B57:01	KIGEETGSW	0.9775	0.997	0.2352	483.5	0.7298	NA	1/139	1/4234
Fusion	Cervix	FAT1--NTRK3	HLA-B57:01	RTSTASTLM	0.9788	0.9663	0.8749	254	0.4522	NA	1/139	1/4234
Fusion	Cervix	FAT1--NTRK3	HLA-C07:01	ARTSTASTL	0.996	0.7274	0.367	488	0.1665	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-A02:05	MQNHLTQMTL	0.9625	0.8668	1.3951	63.6	0.4028	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-A02:05	WLFISMQNHL	0.9868	0.6127	0.9621	118.6	0.7616	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	MQNHLTQMTL	0.9751	0.9036	0.7304	12.1	0.1964	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	MQNHLTQM	0.952	0.8361	1.1249	27.5	0.4903	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	ASFWLFISM	0.9017	0.8131	1.3629	39.3	0.7139	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	SMQNHLTQM	0.8923	0.7951	0.7286	25.8	0.4636	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	SVTVLRASF	0.8573	0.9183	1.004	152.9	1.8769	NA	1/139	1/4234
Fusion	Cervix	ALKBH5--GID4	HLA-B15:03	VLRASFWLF	0.6656	0.9226	1.2398	33.1	0.6058	NA	1/139	1/4234
Fusion	Cervix	NUDT14--BRF1	HLA-A74:11	RQTMAVMAMR	0.9858	0.7605	0.6488	62.4	0.0141	NA	1/139	1/4234
Fusion	Cervix	NUDT14--BRF1	HLA-A74:11	QTMAVMAMR	0.9761	0.9183	0.0671	146.9	0.0545	NA	1/139	1/4234
Fusion	Cervix	NUDT14--BRF1	HLA-B15:03	RQTMAVMAM	0.8702	0.8176	0.1688	2.6	0.0088	NA	1/139	1/4234
Fusion	Cervix	TRAF3IP2--REV3L	HLA-B53:01	FPGLPRHHTVW	0.9965	0.5905	0.4808	169.1	0.1956	NA	1/139	1/4234
Fusion	Cervix	CADM4--ZSCAN18	HLA-B53:01	WAAAAGPGLW	0.9803	0.8469	0.5904	55.7	0.0706	NA	1/139	1/4234
Fusion	Cervix	CADM4--ZSCAN18	HLA-B53:01	AAAAGPGLW	0.9274	0.8395	0.4951	405	0.4035	NA	1/139	1/4234
Fusion	Cervix	TRPV4--GIT2	HLA-C08:02	YASDNVELIL	0.9992	0.9363	0.3987	367	0.0395	NA	1/139	1/4234
Fusion	Cervix	TRPV4--GIT2	HLA-C08:02	ASDNVELIL	0.9998	0.9602	0.037	280.7	0.0317	NA	1/139	1/4234
Fusion	Cervix	TRPV4--GIT2	HLA-C08:02	YASDNVELI	0.9947	0.9226	0.3057	463.6	0.0532	NA	1/139	1/4234
Fusion	Cervix	APIP--SLC1A2	HLA-A31:01	CTSGGYYRDR	0.877	0.5752	1.8773	201.9	1.2151	NA	1/139	1/4234
Fusion	Cervix	HID1--SRP68	HLA-C12:03	KTQAYTAYL	0.7499	0.9074	0.68	118.7	0.5227	NA	1/139	1/4234
Fusion	Cervix	GET4--DNAAF5	HLA-A31:01	ALTLWKERR	0.9206	0.7153	0.9525	177.3	1.1061	NA	1/139	1/4234
Fusion	Cervix	GET4--DNAAF5	HLA-A31:01	LALTLWKER	0.9402	0.8348	0.8186	148.5	0.9926	NA	1/139	1/4234
Fusion	Cervix	PPP5C--HIF3A	HLA-C07:02	HRKCAYQSF	0.8008	0.9415	0.5312	216.6	0.1418	NA	1/139	1/4234
Fusion	Cervix	RASAL1--DDX54	HLA-B15:01	LLLAKLGKF	0.9461	0.8807	1.014	186.4	0.8661	NA	1/139	1/4234
Fusion	Cervix	SASH1--PACRG	HLA-C16:01	RVSQDLEVM	0.9524	0.962	0.5399	243.4	0.7892	NA	1/139	1/4234
Fusion	Cervix	HEG1--YAP1	HLA-B07:05	RPLPDGWEQAM	0.9997	0.7402	0.4902	121.6	0.3896	NA	1/139	1/4234
Fusion	Cervix	NCEH1--BCL2L1	HLA-C03:02	QQVDTFVEL	0.9955	0.9878	0.5038	329.4	1.1084	NA	1/139	1/4234
Fusion	Cervix	CLEC16A--LITAF	HLA-A02:01	VLDLSKMSV	0.9903	0.7232	0.2604	111.2	1.1316	NA	1/139	1/4234
Fusion	Cervix	CASC3--ADCY2	HLA-B18:01	MEVEDHVAFL	0.8003	0.8723	0.4769	274.1	0.1834	NA	1/139	1/4234
Fusion	Cervix	CASC3--ADCY2	HLA-B18:01	EEMEVEDHVAF	0.9983	0.8106	0.2825	41.7	0.0302	NA	1/139	1/4234
Fusion	Cervix	CASC3--ADCY2	HLA-B18:01	MEVEDHVAF	0.9973	0.9103	0.0177	7.3	0.0074	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-A02:02	FVSVSLHSVV	0.9728	0.5053	0.8585	30.6	0.7511	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-A02:02	SLTDLWFVSV	0.9993	0.6195	0.2025	8.7	0.1503	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B15:17	NSVYSLTDLW	0.9949	0.9255	1.9269	46.1	0.7131	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-A02:02	YSLTDLWFV	0.9445	0.5508	0.2482	10.9	0.2182	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B15:17	MSPNSVYSL	0.9229	0.7492	0.3769	137.4	1.506	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B15:17	SVYSLTDLW	0.9966	0.9747	0.0932	12.9	0.1966	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B15:17	VSLHSVVIF	0.9936	0.7719	0.3822	7.1	0.0772	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B15:17	VSVSLHSVV	0.9497	0.9502	1.2828	67	0.9572	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-B45:01	KEMMSPNSV	0.9988	0.9276	0.3152	58.4	0.0662	NA	1/139	1/4234
Fusion	Cervix	JAG1--SLX4IP	HLA-C05:01	LTDLWFVSV	0.9999	0.9908	0.1527	469.7	0.1831	NA	1/139	1/4234
Fusion	Cervix	DYNC2H1--CEP126	HLA-A02:01	NLWKKLNQI	0.9605	0.6231	0.1915	65.2	0.7848	NA	1/139	1/4234
Fusion	Cervix	DYNC2H1--CEP126	HLA-C16:02	KTHPSKILY	0.5806	0.9772	0.024	212.1	0.1983	NA	1/139	1/4234
Fusion	Cervix	PLGRKT--JAK2	HLA-A02:14	FMLMNARLQV	0.9937	0.7474	0.9663	62	0.3855	NA	1/139	1/4234
Fusion	Cervix	PLGRKT--JAK2	HLA-A02:14	MLMNARLQV	0.9978	0.7418	0.1369	44.1	0.2668	NA	1/139	1/4234
Fusion	Cervix	PLGRKT--JAK2	HLA-A68:02	MLMNARLQV	0.9595	0.9134	1.8454	166.5	0.9965	NA	1/139	1/4234
Fusion	Cervix	ARHGAP35--SAE1	HLA-C07:02	RRNTKKVVF	0.9402	0.7611	0.1465	217.7	0.1426	NA	1/139	1/4234
Fusion	Cervix	CADPS2--RPGR	HLA-B44:03	TEYAKIEDY	0.9985	0.8939	0.1196	60.7	0.0675	NA	1/139	1/4234
Fusion	Cervix	CADPS2--RPGR	HLA-C03:04	YAKIEDYLL	0.998	0.9898	0.281	351.4	0.7916	NA	1/139	1/4234
Fusion	Cervix	TTLL10--CTAG2	HLA-C07:01	CRPPPTAAL	0.9889	0.7743	0.1807	276.6	0.1001	NA	1/139	1/4234
Fusion	Cervix	ERBB2--PPP1R1B	HLA-B07:02	APLTCSPQPA	0.9316	0.5376	1.1056	484.1	0.815	NA	1/139	1/4234
Fusion	Cervix	TTC7B--CCDC88C	HLA-A02:01	HLFEPNYAA	0.9902	0.6584	0.0558	21.2	0.2898	NA	1/139	1/4234
Fusion	Cervix	ITGA2--PARP8	HLA-A02:22	LALSQDNTYV	0.8927	0.6299	1.3306	12.5	0.4307	NA	1/139	1/4234
Fusion	Cervix	KIAA0100--CRHR1	HLA-B15:03	KLLSHDLPPF	0.9618	0.8074	1.2493	28.9	0.5172	NA	1/139	1/4234
Fusion	Cervix	KIAA0100--CRHR1	HLA-B15:03	LSHDLPPFSF	0.9991	0.9044	1.9129	89.5	1.3274	NA	1/139	1/4234
Fusion	Cervix	KIAA0100--CRHR1	HLA-B15:03	LLSHDLPPF	0.7474	0.754	1.0891	24.9	0.448	NA	1/139	1/4234
Fusion	Cervix	PITPNC1--SKAP1	HLA-B35:08	MPLTVDEM	0.9849	0.931	0.786	418.3	0.2472	NA	1/139	1/4234
Fusion	Cervix	TRIM37--MED13	HLA-B15:03	RRWSVGEWTF	0.8582	0.9598	0.2213	51.4	0.8846	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A02:11	WLVQPLPPPA	0.9552	0.6465	1.3108	27.9	1.2951	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A03:01	RTFSGFPAWK	0.9995	0.5887	0.0344	8.2	0.0094	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	HPAALPVPFF	0.9967	0.519	0.1527	25.1	0.0578	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	RPWPPACSCF	0.9177	0.5739	0.538	351.2	0.6986	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A02:11	FLKSLGTTTTL	0.8405	0.6607	1.9269	15.8	0.8622	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	RPWPPACSCFY	0.982	0.5601	0.6018	446.4	0.8653	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A02:11	FLPGCRGGV	0.9255	0.7489	0.3736	47.6	1.8115	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A02:11	LLGKHPAAL	0.9558	0.5251	0.3427	21.4	1.0759	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-A03:01	RLGGLCTAK	0.9981	0.5613	0.1498	67.3	0.2543	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:03	GPTWASCPL	0.8675	0.8429	1.1617	485.7	0.0836	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:03	HPAALPVPF	0.9928	0.6895	0.1401	31.3	0.0082	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	FPAWKKRTL	0.8767	0.6536	0.0762	319.1	0.6514	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	HPAALPVPF	0.9962	0.5274	0.1168	4.5	0.0081	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	MPGGSCWRL	0.8957	0.7876	1.3273	289.3	0.6028	NA	1/139	1/4234
Fusion	Cervix	NARF--HEXDC	HLA-B35:05	WPGQYGPTW	0.9579	0.734	0.9889	323.7	0.6583	NA	1/139	1/4234
Fusion	Cervix	CALR--ZNF799	HLA-A02:01	GVLGLDLWQA	0.9526	0.8173	0.7967	163.2	1.4546	NA	1/139	1/4234
Fusion	Cervix	CALR--ZNF799	HLA-A02:01	GLDLWQASV	0.9938	0.7055	0.4277	35.4	0.4674	NA	1/139	1/4234
Fusion	Cervix	CALR--ZNF799	HLA-A02:01	VLGLDLWQA	0.9746	0.8002	0.4548	38.5	0.5013	NA	1/139	1/4234
Fusion	Cervix	FBXO42--EPHA2	HLA-A32:01	RSASPTACW	0.987	0.9389	0.0177	161.1	0.2876	NA	1/139	1/4234
Fusion	Cervix	FBXO42--EPHA2	HLA-C12:02	FSHTTSRGL	0.9796	0.9574	0.4096	122.2	0.1534	NA	1/139	1/4234
Fusion	Cervix	CHEK2--LARGE1	HLA-A11:01	ATTPRPTPWR	0.9888	0.5234	0.7058	262.3	1.2	NA	1/139	1/4234
Fusion	Cervix	CHEK2--LARGE1	HLA-B44:02	AEATTPRPTPW	0.9998	0.9273	0.1947	19.4	0.0131	NA	1/139	1/4234
Fusion	Cervix	CHEK2--LARGE1	HLA-A11:01	SAGSSAWPR	0.9662	0.5352	0.7356	285.3	1.2637	NA	1/139	1/4234
Fusion	Cervix	CHEK2--LARGE1	HLA-B14:03	WRNARQSTL	0.7671	0.8307	0.3974	189.6	0.0091	NA	1/139	1/4234
Fusion	Cervix	CDH13--TXNDC11	HLA-A02:01	LLSQITEVAL	0.9818	0.6939	0.5077	82.3	0.9277	NA	1/139	1/4234
Fusion	Cervix	CDH13--TXNDC11	HLA-A02:01	VLLSQITEVA	0.9815	0.7606	1.0678	197	1.6304	NA	1/139	1/4234
Fusion	Cervix	CDH13--TXNDC11	HLA-A02:01	VLLSQITEVAL	0.9709	0.7255	0.5296	209.1	1.6935	NA	1/139	1/4234
Fusion	Cervix	CDH13--TXNDC11	HLA-A02:01	VLLSQITEV	0.9974	0.6958	0.0007	5.2	0.0381	NA	1/139	1/4234
Fusion	Cervix	RLN2--CD274	HLA-B07:02	APQTPRPVAA	0.9957	0.793	0.0073	45.3	0.1597	NA	1/139	1/4234
Fusion	Cervix	RLN2--CD274	HLA-B07:02	RPVAAPYNKI	0.9423	0.5211	0.251	172.9	0.4286	NA	1/139	1/4234
Fusion	Cervix	RLN2--CD274	HLA-B07:02	TPRPVAAPY	0.9807	0.7041	0.2165	172.6	0.4281	NA	1/139	1/4234
Fusion	Cervix	OAS1--RPH3A	HLA-A02:01	LLPGEETMGL	0.796	0.6203	0.9315	211.7	1.7067	NA	1/139	1/4234
Fusion	Cervix	OAS1--RPH3A	HLA-A02:01	RLVKHWYQNV	0.9662	0.7363	1.1792	200.2	1.6473	NA	1/139	1/4234
Fusion	Cervix	OAS1--RPH3A	HLA-B39:12	RRQALTQPL	0.9683	0.9543	1.5067	367.6	0.073	NA	1/139	1/4234
Fusion	Cervix	OAS1--RPH3A	HLA-C07:02	RRQALTQPL	0.9237	0.9643	0.645	251.9	0.1655	NA	1/139	1/4234
Fusion	Cervix	FANCM--PRPF39	HLA-C07:02	YRIICLEIF	0.9674	0.9526	0.5213	462.1	0.3008	NA	1/139	1/4234
Fusion	Cervix	SNRNP40--COL6A5	HLA-B15:17	EMSLFKNITW	0.9304	0.9123	1.6327	44	0.6868	NA	1/139	1/4234
Fusion	Cervix	SNRNP40--COL6A5	HLA-B15:17	MSLFKNITWMW	0.981	0.9292	1.7953	37.7	0.6058	NA	1/139	1/4234
Fusion	Cervix	SNRNP40--COL6A5	HLA-B15:17	MSLFKNITW	0.9971	0.9309	0.024	3.7	0.0137	NA	1/139	1/4234
Fusion	Cervix	STAT3--KAT2A	HLA-B35:03	WPMKPVSVM	0.9974	0.7528	0.0808	29.2	0.008	NA	1/139	1/4234
Fusion	Cervix	STAT3--KAT2A	HLA-B35:05	WPMKPVSVM	0.9943	0.5992	0.0979	8.3	0.0151	NA	1/139	1/4234
Fusion	Cervix	ZDHHC18--ARID1A	HLA-A68:01	HTTQSDPPIAR	0.9975	0.702	0.1963	114.5	0.9909	NA	1/139	1/4234
Fusion	Cervix	PIK3R3--MOB3C	HLA-B07:02	APGPAGHGPV	0.9948	0.6792	0.538	69.7	0.224	NA	1/139	1/4234
Fusion	Cervix	PIK3R3--MOB3C	HLA-B07:02	SPWTAAPGPA	0.9919	0.6267	1.0214	183.9	0.4469	NA	1/139	1/4234
Fusion	Cervix	S100P--BZW2	HLA-C07:02	MRLVMTLKL	0.9276	0.9625	0.2428	100.9	0.0551	NA	1/139	1/4234
Fusion	Cervix	S100P--BZW2	HLA-C07:02	SRGLMRLVM	0.982	0.9109	0.1527	418.2	0.275	NA	1/139	1/4234
Fusion	Cervix	FGFR3--TACC3	HLA-C05:01	STDFKESAL	0.9999	0.9297	0.0631	196.2	0.0913	NA	1/139	1/4234
Fusion	Cervix	CCT3--IQGAP3	HLA-A32:01	CMHPTLLSV	0.5503	0.9014	0.8629	480.9	0.7361	NA	2/139	2/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-B07:02	SARRPGLPAA	0.9891	0.7718	0.5619	395.1	0.7278	NA	1/139	1/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-B07:02	RPGLPAAV	0.9997	0.6269	0.5534	146.7	0.3844	NA	1/139	1/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-A02:01	CLPLKMLLV	0.9103	0.6488	0.5706	259.1	1.9418	NA	1/139	1/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-A02:01	GLANQAHQV	0.9973	0.7095	0.0412	45.1	0.5766	NA	1/139	1/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-B07:02	SARRPGLPA	0.9948	0.5386	0.2039	70.4	0.2258	NA	1/139	1/4234
Fusion	Cervix	RAB11A--PPP6R3	HLA-C07:02	RRSARRPGL	0.8953	0.9582	1.004	439.8	0.2879	NA	1/139	1/4234
Fusion	Cervix	SIK2--C11orf53	HLA-A32:01	RLLRCQKIF	0.9326	0.9474	0.6137	201.4	0.3547	NA	1/139	1/4234
Fusion	Cervix	MSH2--CCDC57	HLA-C07:02	LRQEGLPKL	0.8213	0.982	0.2778	327.8	0.2171	NA	1/139	1/4234
